The evaluation of SARS-CoV-2 mutations at the early stage of the pandemic in Istanbul population.

The evaluation of SARS-CoV-2 mutations at the early stage of the pandemic in Istanbul population.

Publication date: Oct 10, 2024

Determination of SARS-CoV-2 variant is significant to prevent the spreads of COVID-19 disease. We aimed to evaluate the variants of SARS-CoV-2 rate in positive patients in Kanuni Sultan Suleyman Training and Research Hospital (KSS-TRH), Istanbul, TcFCrkiye between 1st January and 30th November 2021 by using RT-PCR method. Herein, 825,169 patients were evaluated (male:58. 53% and female:41. 47%) whether COVID-19 positive or not [( +):21. 3% and (-):78. 7%] and 175,367 patient was described as positive (53. 2%-female and 46. 8%-male) by RT-PCR. COVID-19 positive rate is observed highest in the 6-15- and 66-75-year age range. The frequencies were obtained as SARS-CoV-2 positive (without mutation of B. 1.1. 7 [B. 1.1. 7 (U. K), E484K, L452R, B. 1.351 (S. Africa/Brazil) spike mutations] as 66. 1% (n: 115,899), B. 1.1. 7 Variant as 23. 2% (n:40,686), Delta mutation (L452R) variant as 9. 8% (n:17,182), B. 1.351 variant as 0. 8% (n:1370) and E484K as 0. 1% (n: 230). In April 2021, general SARS-CoV-2 and B. 1.1. 7 variant were dominantly observed. Up to July 2021, B. 1.617. 2 (Delta variant/ Indian variant) and E484K has been not observed. B. 1.351 variant of SARS-CoV-2 has been started in February 2021 at the rarest ratio and March 2021 is the top point. September 2021 is the pick point of E484K. African/Brazil variant of SARS-CoV-2 has been started in February 2021 at the rarest ratio and March 2021 is the top point. September 2021 is the pick point of E484K. When the gender type is compared within the variants, women were found to be more prevalent in all varieties. The meaning of these mutations is very important to understand the transmission capacity of the COVID-19 disease, pandemic episode, and diagnosis of the virus with mutation types. Understanding the variant type is important for monitoring herd immunity and the spread of the disease.

Concepts Keywords
Brazil Adolescent
July Adult
Pandemic Aged
Pcr Aged, 80 and over
Child
Child, Preschool
COVID-19
COVID-19
Delta
Epsilon
Female
Humans
Infant
Kappa
Male
Middle Aged
Mutation
Mutation
Pandemics
RT‐PCR
SARS-CoV-2
SARS-CoV-2
Spike Glycoprotein, Coronavirus
Spike Glycoprotein, Coronavirus
Turkey
Young Adult

Semantics

Type Source Name
disease MESH COVID-19
drug DRUGBANK Protirelin

Original Article

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