Identification of targetable epigenetic vulnerabilities in uveal melanoma

Publication date: Oct 10, 2024

Uveal melanoma (UM) is the most prevalent primary intraocular malignancy in adults, which preferentially metastasizes to the liver in approximately half of all cases. Metastatic UM is notoriously resistant to therapy and is almost uniformly fatal. UM metastasis is most strongly associated with mutational inactivation of the BAP1 tumor suppressor gene. Given the role of BAP1 in epigenetic regulation as the ubiquitin hydrolase subunit of the polycomb repressive deubiquitinase (PR-DUB) complex, we conducted high-throughput drug screening using a well-characterized epigenetic compound library to identify new therapeutic vulnerabilities. We identified several promising new lead compounds, in particular the extra-terminal domain protein (BET) inhibitor mivebresib (ABBV-075). Mivebresib significantly improved survival rates in a metastatic uveal melanoma xenograft mouse model and entirely prevented detectable metastases to the bones, spinal cord, and brain. RNA sequencing revealed a notable overlap between the genes and pathways affected by HDAC and BET inhibition, including the reversal of gene signatures linked to high metastatic risk and upregulation of genes associated with a neuronal phenotype. Together, we found that UM cells are particularly vulnerable to class I HDAC and BET inhibition, and highlight the BET inhibitor mivebresib as a promising candidate for further clinical evaluation.

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Concepts Keywords
Atp Bet
Cancerous Biorxiv
H3k27ac Compounds
Inactivated Expression
Texas Fig
Hdac
Ic50
Inhibitor
Metastatic
Mivebresib
Mp41
Preprint
Romidepsin
Treated
Treatment

Semantics

Type Source Name
disease MESH uveal melanoma
disease MESH malignancy
disease MESH metastasis
disease MESH melanomas
disease MESH nevi
drug DRUGBANK Romidepsin
drug DRUGBANK Methylergometrine
drug DRUGBANK Selenium
drug DRUGBANK Dimethyl sulfoxide
drug DRUGBANK Bortezomib
drug DRUGBANK ATP
disease MESH death
drug DRUGBANK Aspartame
drug DRUGBANK Rifampicin
disease MESH weight loss
drug DRUGBANK Collagenase clostridium histolyticum
drug DRUGBANK Amphotericin B
drug DRUGBANK Quisinostat
drug DRUGBANK Vorinostat
drug DRUGBANK Panobinostat
drug DRUGBANK Belinostat
drug DRUGBANK Entinostat
drug DRUGBANK Mocetinostat
drug DRUGBANK Gemcitabine
drug DRUGBANK Treosulfan
drug DRUGBANK Staurosporine
pathway REACTOME Apoptosis
drug DRUGBANK Camptothecin
drug DRUGBANK Podofilox
disease MESH monosomy
drug DRUGBANK Pidolic Acid
pathway REACTOME Acetylation
drug DRUGBANK Nerve Growth Factor
drug DRUGBANK Myricetin
drug DRUGBANK Tretinoin
drug DRUGBANK Spinosad
disease MESH cutaneous T cell lymphoma
disease MESH myeloid leukemia
disease MESH brain metastases
disease MESH Blindness
drug DRUGBANK Talazoparib

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