Artificial intelligence and its application in clinical microbiology.

Publication date: Mar 25, 2025

Traditional microbiological diagnostics face challenges in pathogen identification speed and antimicrobial resistance (AMR) evaluation. Artificial intelligence (AI) offers transformative solutions, necessitating a comprehensive review of its applications, advancements, and integration challenges in clinical microbiology. This review examines AI-driven methodologies, including machine learning (ML), deep learning (DL), and convolutional neural networks (CNNs), for enhancing pathogen detection, AMR prediction, and diagnostic imaging. Applications in virology (e. g. COVID-19 RT-PCR optimization), parasitology (e. g. malaria detection), and bacteriology (e. g. automated colony counting) are analyzed. A literature search was conducted using PubMed, Scopus, and Web of Science (2018-2024), prioritizing peer-reviewed studies on AI’s diagnostic accuracy, workflow efficiency, and clinical validation. AI significantly improves diagnostic precision and operational efficiency but requires robust validation to address data heterogeneity, model interpretability, and ethical concerns. Future success hinges on interdisciplinary collaboration to develop standardized, equitable AI tools tailored for global healthcare settings. Advancing explainable AI and federated learning frameworks will be critical for bridging current implementation gaps and maximizing AI’s potential in combating infectious diseases.

Concepts Keywords
Bacteriology antibiotic resistance
Expert Artificial intelligence
Global convolutional neural networks
Transformative deep learning
Healthcare
infectious diseases
machine learning
microbial diagnostics
Parasitology
Virology

Semantics

Type Source Name
disease IDO pathogen
disease MESH COVID-19
disease MESH malaria
pathway KEGG Malaria
disease IDO colony
drug DRUGBANK Spinosad
disease MESH infectious diseases
disease IDO antibiotic resistance

Original Article

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