Autism spectrum disorder risk genes have convergent effects on transcription and neuronal firing patterns in primary neurons

Publication date: Mar 25, 2025

Autism spectrum disorder (ASD) is a highly heterogenous neurodevelopmental disorder with numerous genetic risk factors. Notably, a disproportionate number of risk genes encode transcription regulators including transcription factors and proteins that regulate chromatin. Here, we tested the function of nine such ASD-linked transcription regulators by depleting them in primary cultured neurons. We then defined the resulting gene expression disruptions using RNA-sequencing and tested effects on neuronal firing using multielectrode array recordings. We identified shared gene expression signatures across many ASD risk genes that converged on disruption of critical synaptic genes. Fitting with this, we detected drastic disruptions to neuronal firing throughout neuronal maturation. Together, these findings provide evidence that multiple ASD-linked transcriptional regulators disrupt transcription of synaptic genes and have convergent effects on neuronal firing that may contribute to enhanced ASD risk.

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Concepts Keywords
1dp1mh129957 Al
Autism Asd
Remodelers Biorxiv
Volcano Chromatin
Depletion
Expression
Fig
International
Linked
Multiple
Neuronal
Neurons
Preprint
Regulators
Transcriptional

Semantics

Type Source Name
disease MESH Autism spectrum disorder
disease MESH neurodevelopmental disorder
drug DRUGBANK Aspartame
disease MESH psychiatric disorders
pathway REACTOME Chromatin modifying enzymes
drug DRUGBANK Cysteamine
disease MESH syndromes
disease MESH viral infection
pathway REACTOME Metabolism
drug DRUGBANK Mecasermin
drug DRUGBANK Aminosalicylic Acid
disease MESH social anxiety
disease MESH Autism
drug DRUGBANK L-Lysine
drug DRUGBANK Dextrose unspecified form
drug DRUGBANK Calcium Phosphate
drug DRUGBANK Polyethylene glycol
drug DRUGBANK Tromethamine
drug DRUGBANK Sodium lauryl sulfate
drug DRUGBANK Glycerin
drug DRUGBANK Glycine
drug DRUGBANK Acetate ion

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