Publication date: Mar 24, 2025
The reported new confirmed cases of Coronavirus Disease 2019 (COVID-19) nowadays have diminished in their usefulness for assessing the pandemic situation. This study aimed to discover the correlation of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) variants recorded by Nextstrain clade and PANGO lineage and the number of new confirmed cases. Percent stacked area charts were utilized to display their development trends. 31 and 1452 variants were named according to Nextstrain clade and PANGO lineage, respectively. The branch step value maintained a stable increase by linear regression analysis. The changing trend in SARS-CoV-2 variants (PANGO lineage) correlated negatively with the number of new confirmed COVID-19 cases through Spearman rank correlation coefficient (17/06/2020-17/11/2021, ρ=-0. 387, P
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| Concepts | Keywords |
|---|---|
| Coronavirus | COVID-19 |
| Covid | COVID-19 pandemic |
| Low | Epidemics |
| Pandemic | Humans |
| Monitoring | |
| Nextstrain clade | |
| Pandemics | |
| PANGO lineage | |
| SARS-CoV-2 | |
| SARS-CoV-2 variation |
Semantics
| Type | Source | Name |
|---|---|---|
| disease | MESH | COVID-19 |
| disease | MESH | emergency |
| disease | MESH | infection |
| disease | MESH | infectious diseases |
| pathway | REACTOME | Reproduction |
| disease | IDO | infectivity |
| disease | MESH | viral load |
| drug | DRUGBANK | Coenzyme M |
| disease | IDO | process |
| disease | MESH | measles |
| pathway | KEGG | Measles |