Analysis of Variants Induced by Combined Ex Vivo Irradiation and In Vivo Tumorigenesis Suggests a Role for the ZNF831 p.R1393Q Variant in Cutaneous Melanoma Development.

Publication date: Jul 01, 2025

UVR is known to be the most important environmental carcinogen for cutaneous melanoma. Whereas genomic analyses of melanoma tumors implicate a high rate of UV damage, the experimental induction and recovery of bona fide UV-signature changes have not been directly observed. To replicate recurrent UV variants from The Cancer Genome Atlas_SKCM specimens, we UV irradiated cultured immortalized human melanocytes and subjected them to in vivo tumorigenesis assays. Exome sequencing of the xenografted tumors revealed an increase in UV-signature mutations within the tumors and identified 48 induced variants that overlap with The Cancer Genome Atlas skin cutaneous melanoma UV-hotspot mutations. A UV-induced mutation, ZNF831 p. R1393Q, was correlated with a decreased survival (hazard ratio = 5. 44, 95% confidence interval = 1. 92-15. 47, P = .0015) and was preferentially observed in melanomas compared with that in all The Cancer Genome Atlas tumors (P = 4. 42 cD7 10). In addition, ZNF831 mRNA expression loss was strongly associated with decreased patient survival (hazard ratio = 2. 14, 95% confidence interval = 1. 62-2. 83, P = 7. 91 cD7 10), although the transcripts may arise from multiple cell types, including T cells. In multiple melanoma lines, overexpression of wild-type ZNF831 reduced spheroid growth, heightened apoptosis, and increased cell motility, with the ZNF831 p. R1393Q variant partially or wholly abolishing these functional phenotypes. We thus experimentally recovered a “functional UV-hotspot mutation” in ZNF831 that is altered in human melanoma specimens.

Concepts Keywords
Atlas Melanoma
Environmental Tumorigenesis
Tumorigenesis UV hotspot
Wild ZNF831

Semantics

Type Source Name
disease MESH Tumorigenesis
disease MESH Melanoma
pathway KEGG Melanoma
disease MESH tumors
pathway REACTOME Apoptosis

Original Article

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