ADME analysis, metabolic prediction, and molecular docking of lipoic acid with SARS-CoV-2 Omicron spike protein.

Publication date: Jul 08, 2025

Lipoic acid (ALA), also known as 1,2-dithiolane-3-pentanoic acid, is a natural antioxidant and a critical component of mitochondrial function, where it participates in several key enzymatic processes. This organosulfur compound is derived from both plant and animal sources and was initially studied as a potential substitute for acetate. This study aims to examine the parameters related to ADME, metabolic, and structural binding analyses. Furthermore, a molecular docking analysis was performed to explore how ALA interacts with the Omicron variant of SARS-CoV-2. The study revealed that ALA exhibited high gastrointestinal absorption (GI absorption) and a Log Kp (skin permeation) value of -6. 37 cm/s. The compound showed compliance with drug-likeness rules, including Lipinski, Ghose, Veber, Egan, and Muegge criteria, but was flagged with a Brenk alert due to the disulfide bond. It demonstrated acute oral toxicity and eye irritation/corrosion, with chemical reactivity involving epoxidation of the oxygen double bond, quinonation, and N-dealkylation processes. In contrast, there was a strong conjugation reaction with UDP-glucuronosyltransferase (UGT) and moderate reactivity with glutathione (GSH), sulfur, and adjacent carbons. Protein interactions displayed medium reactivity, while DNA reactivity was moderate. Additionally, the compound showed limited reactions in unstable oxidation processes and other pathways but exhibited affinity for various enzymes and receptors, including cyclooxygenase-2 and acetylcholinesterase. Molecular docking revealed a predominance of conventional hydrogen bonding with an affinity of -4. 4 kcal/mol. These findings suggest a promising pharmacological profile, warranting further investigation into its clinical effects and applications.

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Concepts Keywords
4kcal Animals
Acetylcholinesterase COVID-19
Docking COVID-19
Gastrointestinal Docking molecular
High Glutathione
Humans
In Sílico
Molecular Docking Simulation
Protein Binding
Quinonation
SARS-CoV-2
Spike Glycoprotein, Coronavirus
Spike Glycoprotein, Coronavirus
spike protein, SARS-CoV-2
Thioctic Acid
Thioctic Acid
UDP-glucuronosyltransferase

Semantics

Type Source Name
drug DRUGBANK Lipoic Acid
disease IDO protein
drug DRUGBANK Alpha-Linolenic Acid
drug DRUGBANK Acetate ion
drug DRUGBANK Oxygen
drug DRUGBANK Glutathione
disease MESH COVID 19
drug DRUGBANK Dihydrolipoic Acid
pathway REACTOME Metabolism
drug DRUGBANK Coenzyme M
disease IDO deoxyribonucleic acid
drug DRUGBANK Saquinavir
drug DRUGBANK ANX-510
drug DRUGBANK Ascorbic acid
drug DRUGBANK L-Cysteine
drug DRUGBANK Cystine
disease MESH infections
disease MESH inflammation
disease MESH oxidative stress
disease MESH viral infections
disease IDO production
disease IDO immune response
disease IDO infection
disease MESH critically ill
drug DRUGBANK Water
disease IDO homo sapiens
drug DRUGBANK Spinosad
pathway KEGG Drug metabolism
pathway KEGG Metabolic pathways
drug DRUGBANK L-Asparagine
drug DRUGBANK Serine
drug DRUGBANK L-Threonine
drug DRUGBANK Ebselen
disease IDO process
drug DRUGBANK Amino acids

Original Article

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